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KMID : 0364820200560020183
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Korean Journal of Microbiology
2020 Volume.56 No. 2 p.183 ~ p.185
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Whole genome of strain RR4-40, novel bacterium in the family Flavobacteriaceae
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Kim Young-Sam
Kim Seong-Jin
Kim Kyoung-Ho
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Abstract
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Strain RR4-40, a novel bacterium within the family Flavobacteriaceae was isolated from a biofilter of seawater recirculating
aquaculture system (RAS) in Busan, South Korea. Its complete genome was obtained using PacBio RS II platform
and was 3,386,965 bp in size with 37.4% G + C content. The genome annotation presented that the genome comprises a total of 3,018 genes, 2,973 CDSs, 6 rRNAs, 35 tRNAs, and 4 ncRNAs. Genes related to osmotic regulation, peptidoglycan
degradation, protein hydrolysis, and antibacterial peptides were detected in the genome. The genome analysis showed that strain RR4-40 might be associated with biodegradation of waste materials and antimicrobial activity in the RAS.
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KEYWORD
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Flavobacteriaceae, complete genome, recirculating aquaculture system
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